Fagområder
Virologi; Bioinformatikk; NGS
Prosjekter og publikasjoner
- Ina Jungersen Andresen, Russell Orr, Anders Kristian Krabberød, Kamran Shalchian-Tabrizi, Jon Bråte, (2021). Genome sequencing and de novo assembly of the giant unicellular alga Acetabularia acetabulum using droplet MDA. Scientific Reports doi: 10.1038/s41598-021-92092-4
- Øyvind Sætren Gulbrandsen, Ina Jungersen Andresen, Anders Kristian Krabberød, Jon Bråte, Kamran Shalchian-Tabrizi, (2021). Phylogenomic analysis restructures the Ulvophyceae. Journal of Phycology s. 1-11. doi: 10.1111/jpy.13168
- Omaya Dudin, Andrej Ondracka, Xavier Grau-Bové, Arthur Alexander Blørstad Haraldsen, Atsushi Toyoda, Hiroshi Suga, Jon Bråte, Iñaki Ruiz-Trillo, (2019). A unicellular relative of animals generates a layer of polarized cells by actomyosin-dependent cellularization. eLIFE s. 1-27. doi: 10.7554/eLife.49801
- Omaya Dudin, Andrej Ondracka, Xavier Grau-Bové, Arthur Alexander Blørstad Haraldsen, Atsushi Toyoda, Hiroshi Suga, Jon Bråte, Iñaki Ruiz-Trillo, (2019). A unicellular relative of animals generates an epithelium-like cell layer by actomyosin-dependent cellularization. BioRxiv doi: 10.1101/563726
- Jon Bråte, Janina Fuss, Shruti Mehrotra, Kjetill Sigurd Jakobsen, Dag Klaveness, (2019). Draft genome assembly and transcriptome sequencing of the golden algae Hydrurus foetidus (Chrysophyceae). F1000 Research s. 1-12. doi: 10.12688/f1000research.16734.3
- Jon Bråte, Ralf Stefan Neumann, Bastian Fromm, Arthur Alexander Blørstad Haraldsen, James E. Tarver, Hiroshi Suga, Philip C.J. Donoghue, Kevin J. Peterson, Iñaki Ruiz-Trillo, Paul Eivind Grini, Kamran Shalchian-Tabrizi, (2018). Unicellular origin of the animal microRNA machinery. Current Biology s. 3288-3295.e5. doi: 10.1016/j.cub.2018.08.018
- Anders Kristian Krabberød, Russell Orr, Jon Bråte, Tom Kristensen, Kjell Rasmus Bjørklund, Kamran Shalchian-Tabrizi, (2017). Single cell transcriptomics, mega-phylogeny and the genetic basis of morphological innovations in Rhizaria. Molecular Biology and Evolution (MBE) doi: /10.1093/molbev/msx075
- Jon Bråte, Marcin Adamski, Ralf Stefan Neumann, Kamran Shalchian-Tabrizi, Maja Adamska, (2015). Regulatory RNA at the root of animals: dynamic expression of developmental lincRNAs in the calcisponge Sycon ciliatum. Proceedings of the Royal Society of London. Biological Sciences s. 1-9. doi: 10.1098/rspb.2015.1746
- Sven Dirk Leininger, Marcin Adamski, Brith Bergum, Corina Guder, Jing Liu, Mary Laplante, Jon Bråte, Friederike Hoffmann, Sofia A Valero Fortunato, Signe Jordal, Hans Tore Rapp, Maja Adamska, (2014). Developmental gene expression provides clues to relationships between sponge and eumetazoan body plans. Nature Communications doi: 10.1038/ncomms4905
- Jon Bråte, Anders Kristian Krabberød, Jane Karine Lønne Dolven, Randi Frida Ose, Tom Kristensen, Kjell Rasmus Bjørklund, Kamran Shalchian-Tabrizi, (2012). Radiolaria Associated with Large Diversity of Marine Alveolates. Protist s. 767-777. doi: 10.1016/j.protis.2012.04.004
- Sen Zhao, Fabien Burki, Jon Bråte, Patrick J Keeling, Dag Klaveness, Kamran Shalchian-Tabrizi, (2012). Collodictyon - An Ancient Lineage in the Tree of Eukaryotes. Molecular Biology and Evolution (MBE) s. 1557-1568. doi: 10.1093/molbev/mss001
- Dag Klaveness, Jon Bråte, Viswanath Patil, Kamran Shalchian-Tabrizi, Ragnhild Kluge, Hans Ragnar Gislerød, Kjetill Sigurd Jakobsen, (2011). The 18S and 28S rDNA indentity and phylogeny of the common lotic chrysophyte Hydrurus foetidus. European journal of phycology s. 282-291. doi: 10.1080/09670262.2011.598950
- Anders Kristian Krabberød, Jon Bråte, Jane Karine Lønne Dolven, Randi Frida Ose, Dag Klaveness, Tom Kristensen, Kjell Rasmus Bjørklund, Kamran Shalchian-Tabrizi, (2011). Radiolaria Divided into Polycystina and Spasmaria in Combined 18S and 28S rDNA Phylogeny. PLOS ONE doi: 10.1371/journal.pone.0023526
- Kamran Shalchian-Tabrizi, Kjetil Røberg, Dan Kristofer Ree, Dag Klaveness, Jon Bråte, (2011). Marine-Freshwater Colonizations of Haptophytes Inferred from Phylogeny of Environmental 18S rDNA Sequences. Journal of Eukaryotic Microbiology s. 315-318. doi: 10.1111/j.1550-7408.2011.00547.x
- Jon Bråte, Dag Klaveness, T Rygh, Kjetill Sigurd Jakobsen, Kamran Shalchian-Tabrizi, (2010). Telonemia-specific environmental 18S rDNA PCR reveals unknown diversity and multiple marine-freshwater colonizations. BMC Microbiology doi: 10.1186/1471-2180-10-168
- Ramiro Logares, Jon Bråte, F Heinrich, Kamran Shalchian-Tabrizi, Stefan Bertilsson, (2010). Infrequent Transitions between Saline and Fresh Waters in One of the Most Abundant Microbial Lineages (SAR11). Molecular Biology and Evolution (MBE) s. 347-357. doi: 10.1093/molbev/msp239
- Jon Bråte, Ramiro Logares, Cedric Berney, Dan Kristofer Ree, Dag Klaveness, Kjetill Sigurd Jakobsen, Kamran Shalchian-Tabrizi, (2010). Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA. The ISME Journal s. 1144-1153. doi: 10.1038/ismej.2010.39
- Ramiro Logares, Jon Bråte, Stefan Bertilsson, Jessica L Clasen, Kamran Shalchian-Tabrizi, Karin Rengefors, (2009). Infrequent marine-freshwater transitions in the microbial world. Trends in Microbiology s. 414-422. doi: 10.1016/j.tim.2009.05.010
- Ramiro Logares, Jon Bråte, Heinrich Friederike, Kamran Shalchian-Tabrizi, Stefan Bertilsson, (2009). Infrequent transitions between saline and fresh waters in one of the most abundant microbial lineages (SAR11). Molecular Biology and Evolution (MBE) doi: 10.1093/molbev/msp239
- Fabien Burki, Yuji Inagaki, Jon Bråte, John M Archibald, Patrick J Keeling, Thomas Cavalier-Smith, Miako Sakaguchi, Tetsuo Hashimoto, Ales Horak, Surendra Kumar, Dag Klaveness, Kjetill Sigurd Jakobsen, Jan Pawlowski, Kamran Shalchian-Tabrizi, (2009). Large-Scale Phylogenomic Analyses Reveal That Two Enigmatic Protist Lineages, Telonemia and Centroheliozoa, Are Related to Photosynthetic Chromalveolates. Genome Biology and Evolution (GBE) s. 231-238. doi: 10.1093/gbe/evp022
- Patil Vishwanath, Jon Bråte, Kamran Shalchian-Tabrizi, Kjetill Sigurd Jakobsen, (2009). Revisiting the Phylogenetic Position of Synchroma grande. Journal of Eukaryotic Microbiology s. 394-396.
- Kamran Shalchian-Tabrizi, Jon Bråte, R Logares, Dag Klaveness, Cedrik Berney, Kjetill Sigurd Jakobsen, (2008). Diversification of unicellular eukaryotes: cryptomonad colonizations of marine and fresh waters inferred from revised 18S rRNA phylogeny. Environmental Microbiology s. 2635-2644. doi: 10.1111/j.1462-2920.2008.01685.x
- Jon Bråte, Ina Jungersen Andresen, Russell Orr, Kamran Shalchian-Tabrizi, (2021). Compartmentalization of mRNAs in the giant, unicellular green alga Acetabularia acetabulum. Algal Research
- Jon Bråte, (2019). Dyrenes opprinnelse.
- Jon Bråte, (2019). Evolution and development in single-celled eukaryotes.
- Jon Bråte, (2019). Evolution and Function of the ichthyosporean microRNA system.
- Ingrid Spilde, Jon Bråte, Kamran Shalchian-Tabrizi, (2019). Knøttlite mysterium: Hva er egentlig forskjellen på deg og en encellet skapning?.
- Jon Bråte, Yngve Vogt, (2017). Leter etter skillet mellom encellete og flercellete dyr.
- Jon Bråte, (2017). Studying protist evolution using single-cell transcriptomics.
- Jon Bråte, (2017). Single-cell transcriptomics of Sphaeroforma arctica.
- Andreas Evenstad, Line Lieblein Røsæg, Ina Jungersen Andresen, Kamran Shalchian-Tabrizi, Jon Bråte, (2016). Evolution of non-coding RNAs in ctenophores.
- Line Lieblein Røsæg, Andreas Evenstad, Ina Jungersen Andresen, Jon Bråte, Kamran Shalchian-Tabrizi, (2016). Postembryonic development of Mnemiopsis leidyi inferred from gene expression data.
- Arthur Alexander Blørstad Haraldsen, Jon Bråte, Ralf Stefan Neumann, Bastian Fromm, Paul Eivind Grini, Kamran Shalchian-Tabrizi, (2016). Pre-metazoan origin of animal microRNAs.
- Bjarne Røsjø, Jon Bråte, (2016). På spor av det første flercellede dyret.
- Hanna Elina Melteig, Jon Bråte, (2016). Omvendt kreftjakt.
- Jon Bråte, (2015). Genomets mørke materie.
- Jon Bråte, (2015). Genomets mørke materie.
- Jon Bråte, (2015). Genomets mørke materie: nye roller til ikke-kodende RNA.
- Jon Bråte, (2014). Single Cell Protistology - Work in Progress.
- Jon Bråte, (2014). Non-coding RNA and the Origin of Animals.
- Jon Bråte, (2014). Genomets mørke materie - nye roller til ikke-kodende RNA.
- Jon Bråte, (2013). Long non-coding RNAs in the sponge Sycon ciliatum.
- Jon Bråte, (2013). "Søppel-gen" gjorde folk av oss?. Aftenposten (morgenutg. : trykt utg.)
- Jon Bråte, (2013). Søppel-DNA: Hva er det og (hvorfor) trenger vi bry oss?.
- Jon Bråte, (2013). Betydningen av små RNA fragmenter for evolusjon, økologi og epigenetikk.
- Jon Bråte, (2011). 18S+28S phylogeny divides Radiolaria into Polycystina and Spasmaria and supports the Retaria hypothesis.
- Jon Bråte, (2011). Radiolaria revealed as a reservoir of Marine alveolates.
- Jon Bråte, (2011). Encellede eukaryoter - hvordan studere dem genetisk?.
- Eli-Anne Lindstrøm, Jon Bråte, Dag Klaveness, (2010). Hydrurus foetidus - a common and important cold-stenotherm (psychrophilic) primary producer.
- Jon Bråte, (2010). Lake Finsevatn sediment diversity investigated by pyrosequencing.
- Jon Bråte, Anders Kristian Krabberød, Jane Karine Lønne Dolven, Randi Frida Ose, Tom Kristensen, Kjell Rasmus Bjørklund, Kamran Shalchian-Tabrizi, (2010). Diversity of unculturable Radiolaria and their symbionts revealed by 18S rDNA phylogeny.
- Vishwanath Patil, Jon Bråte, D. Klaveness, Ragnhild Kluge, Kamaran Shalchian-Tabrizi, Hans Ragnar Gislerød, Kjetill S. Jakobsen, (2008). Molecular phylogeny of Hydrurus, a fresh water chrysophyte rich in lipids.
- Jon Bråte, (2008). Barriers to Dispersal: Few Marine - Freshwater Colonizations Revealed by Environmental Sequencing.